Detailed information of Aala_g1800.t1 in Alatina alata

Genomic Location: :...
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
P21328RNA-directed DNA polymerase from mobile element jockey OS=Drosophila melanogaster OX=7227 GN=pol PE=1 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF04227Indigoidine_AIndigoidine synthase A like proteinFamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF14750INTS2Integrator complex subunit 2FamilyInterproscan
PF09412XendoUEndoribonuclease XendoUFamilyInterproscan
PF01390SEASEA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR022830Homologous_superfamilyIndigoidine synthase A-likeInterproscan
IPR007342FamilyPseudouridine-5'-phosphate glycosidaseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR053231FamilyG-protein coupled receptor LN-TM7Interproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR029321FamilyIntegrator complex subunit 2Interproscan
IPR039787FamilyPoly(U)-specific endoribonucleaseInterproscan
IPR037227Homologous_superfamilyEndoribonuclease EndoU-likeInterproscan
IPR018998DomainEndoU ribonuclease, C-terminalInterproscan
IPR001879DomainGPCR, family 2, extracellular hormone receptor domainInterproscan
IPR051963FamilyAdhesion G protein-coupled receptor AInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000082DomainSEA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45902LATROPHILIN RECEPTOR-LIKE PROTEIN AInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR28608INTEGRATOR COMPLEX SUBUNIT 2Interproscan
PTHR12439PLACENTAL PROTEIN 11-RELATEDInterproscan
PTHR45930G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004730Molecular Functionpseudouridylate synthase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0032039Cellular Componentintegrator complexInterproscan
GO:0034472Biological ProcesssnRNA 3'-end processingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21812E5; Alphapapillomavirus protein E5-Viral proteinsko03200deepkoala

TOP