Detailed information of Aala_g1802.t1 in Alatina alata

Genomic Location: :...
NR annotation: PIK39730.1, hypothetical protein BSL78_23432 [Apostichopus japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7JQD3Gelsolin-like protein 1 OS=Lumbricus terrestris OX=6398 GN=AM PE=1 SV=1
Q8MPM1Gelsolin-like protein 2 OS=Lumbricus terrestris OX=6398 GN=gelsolin PE=1 SV=1
Q24800Severin OS=Echinococcus granulosus OX=6210 GN=AG8 PE=2 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16203ERCC3_RAD25_CERCC3/RAD25/XPB C-terminal helicaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00626GelsolinGelsolin repeatDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050615FamilyATP-dependent DNA HelicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032438DomainERCC3/RAD25/XPB helicase, C-terminal domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR052311FamilyMMS22L-TONSL complex componentInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR007123DomainGelsolin-like domainInterproscan
IPR007122FamilyVillin/GelsolinInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11274RAD25/XP-B DNA REPAIR HELICASEInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46358TONSOKU-LIKE PROTEINInterproscan
PTHR45749-Interproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11977VILLINInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000112Cellular Componentnucleotide-excision repair factor 3 complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0097550Cellular Componenttranscription preinitiation complexInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0031297Biological Processreplication fork processingInterproscan
GO:0043596Cellular Componentnuclear replication forkInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0005546Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008154Biological Processactin polymerization or depolymerizationInterproscan
GO:0015629Cellular Componentactin cytoskeletonInterproscan
GO:0051014Biological Processactin filament severingInterproscan
GO:0051016Biological Processbarbed-end actin filament cappingInterproscan
GO:0003786Molecular Functionactin lateral bindingInterproscan
GO:0005826Cellular Componentactomyosin contractile ringInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:1903478Biological Processobsolete actin filament bundle convergence involved in mitotic contractile ring assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09257NFKBIL2; NF-kappa-B inhibitor-like protein 2-Exosomeko04147deepkoala
DNA repair and recombination proteinsko03400deepkoala

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