Detailed information of Aala_g1811.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAC5385438.1, unnamed protein product [Mytilus coruscus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91684DNA polymerase subunit gamma-1 OS=Xenopus laevis OX=8355 GN=polg PE=2 SV=1
P54099DNA polymerase subunit gamma-1 OS=Mus musculus OX=10090 GN=Polg PE=1 SV=3
Q9QYV8DNA polymerase subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Polg PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR002297FamilyDNA-directed DNA-polymerase, family A, mitochondriaInterproscan
IPR014010DomainREJ domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR039588FamilyF-box only protein 4Interproscan
IPR001810DomainF-box domainInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10267DNA POLYMERASE SUBUNIT GAMMA-1Interproscan
PTHR16008F-BOX ONLY PROTEIN 4Interproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005760Cellular Componentgamma DNA polymerase complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006264Biological Processmitochondrial DNA replicationInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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