Detailed information of Aala_g182.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028412055.1, uncharacterized protein LOC114534785 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00327Ribosomal_L30Ribosomal protein L30p/L7eDomainInterproscan
PF00112Peptidase_C1Papain family cysteine proteaseDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF10208ARMET_CARMET, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR012332Homologous_superfamilyAutotransporter, pectate lyase C-like domain superfamilyInterproscan
IPR036919Homologous_superfamilyLarge ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyInterproscan
IPR005996FamilyLarge ribosomal subunit protein uL30, bacterial-typeInterproscan
IPR016082DomainLarge ribosomal subunit protein uL30-like, ferredoxin-like fold domainInterproscan
IPR027310Conserved_siteProfilin conserved siteInterproscan
IPR000668DomainPeptidase C1A, papain C-terminalInterproscan
IPR013128FamilyPeptidase C1AInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR039417DomainPapain-like cysteine endopeptidaseInterproscan
IPR025660Active_siteCysteine peptidase, histidine active siteInterproscan
IPR052613FamilyLicD transferaseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR051728FamilyRING-FYVE domain-containing E3 ubiquitin-protein ligaseInterproscan
IPR019345DomainARMET, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR15892MITOCHONDRIAL RIBOSOMAL PROTEIN L30Interproscan
PTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDInterproscan
PTHR13627FUKUTIN RELATED PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33064POL PROTEINInterproscan
PTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070936Biological Processprotein K48-linked ubiquitinationInterproscan
GO:1902042Biological Processnegative regulation of extrinsic apoptotic signaling pathway via death domain receptorsInterproscan
GO:2001271Biological Processobsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02907RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30-Ribosomeko03011deepkoala

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