Gene detail

Detailed information of Aala_g1823.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_037274504.1, uncharacterized protein K02A2.6-like [Rhipicephalus microplus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5ZLH0	NTF2-related export protein 2 OS=Gallus gallus OX=9031 GN=NXT2 PE=2 SV=1
Q9NPJ8	NTF2-related export protein 2 OS=Homo sapiens OX=9606 GN=NXT2 PE=1 SV=1
A6QNX3	NTF2-related export protein 2 OS=Bos taurus OX=9913 GN=NXT2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13764	E3_UbLigase_R4	E3 ubiquitin-protein ligase UBR4	Family	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF02136	NTF2	Nuclear transport factor 2 (NTF2) domain	Domain	Interproscan
PF00849	PseudoU_synth_2	RNA pseudouridylate synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000305	Domain	GIY-YIG endonuclease	Interproscan
IPR025704	Domain	E3 ubiquitin ligase UBR4, C-terminal	Interproscan
IPR045189	Family	E3 ubiquitin ligase UBR4-like	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR018222	Domain	Nuclear transport factor 2, eukaryote	Interproscan
IPR045875	Family	Nuclear transport factor 2	Interproscan
IPR002075	Domain	Nuclear transport factor 2 domain	Interproscan
IPR032710	Homologous_superfamily	NTF2-like domain superfamily	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR050188	Family	RluA Pseudouridine Synthase	Interproscan
IPR006225	Family	Pseudouridine synthase, RluC/RluD	Interproscan
IPR006224	Conserved_site	Pseudouridine synthase, RluA-like, conserved site	Interproscan
IPR006145	Domain	Pseudouridine synthase, RsuA/RluA-like	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR21725	E3 UBIQUITIN-PROTEIN LIGASE UBR4	Interproscan
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR12612	NUCLEAR TRANSPORT FACTOR 2	Interproscan
PTHR21600	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0006913	Biological Process	nucleocytoplasmic transport	Interproscan
GO:0016973	Biological Process	poly(A)+ mRNA export from nucleus	Interproscan
GO:0044613	Cellular Component	nuclear pore central transport channel	Interproscan
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0000455	Biological Process	enzyme-directed rRNA pseudouridine synthesis	Interproscan