Detailed information of Aala_g1846.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAD5114464.1, DgyrCDS3591 [Dimorphilus gyrociliatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3UMY5Echinoderm microtubule-associated protein-like 4 OS=Mus musculus OX=10090 GN=Eml4 PE=1 SV=1
Q9HC35Echinoderm microtubule-associated protein-like 4 OS=Homo sapiens OX=9606 GN=EML4 PE=1 SV=3
Q2TAF3Echinoderm microtubule-associated protein-like 4 OS=Xenopus laevis OX=8355 GN=eml4 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00225KinesinKinesin motor domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR000558FamilyHistone H2BInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR039373FamilyTransferrin receptor protein 1/Glutamate carboxypeptidase 2-likeInterproscan
IPR046450Homologous_superfamilyPA domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan
IPR001752DomainKinesin motor domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR039808FamilyCadherinInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR040108FamilyLaa1/Sip1/HEATR5Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23428HISTONE H2BInterproscan
PTHR10404N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASEInterproscan
PTHR13720WD-40 REPEAT PROTEINInterproscan
PTHR47117STAR-RELATED LIPID TRANSFER PROTEIN 9Interproscan
PTHR24027CADHERIN-23Interproscan
PTHR21663HYPOTHETICAL HEAT DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0004180Molecular Functioncarboxypeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan
GO:0003777Molecular Functionmicrotubule motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0030139Cellular Componentendocytic vesicleInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11252H2B; histone H2B-Thiamine metabolismko00730deepkoala
Exosomeko04147deepkoala

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