Detailed information of Aala_g1847.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015779721.1, PREDICTED: putative nuclease HARBI1 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q64287Interferon regulatory factor 4 OS=Mus musculus OX=10090 GN=Irf4 PE=1 SV=1
Q15306Interferon regulatory factor 4 OS=Homo sapiens OX=9606 GN=IRF4 PE=1 SV=1
Q5U241Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis OX=8355 GN=pds5b-b PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15511CENP-T_CCentromere kinetochore component CENP-T histone foldDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF20168PDS5Sister chromatid cohesion protein PDS5 proteinRepeatInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10401IRF-3Interferon-regulatory factor 3FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001951FamilyHistone H4Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR035425DomainCENP-T/Histone H4, histone foldInterproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR026103FamilyHarbinger transposase-derived nuclease, animalInterproscan
IPR039776FamilySister chromatid cohesion protein Pds5Interproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR019471DomainInterferon regulatory factor-3Interproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10484HISTONE H4Interproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR12663ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11949INTERFERON REGULATORY FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0007064Biological Processmitotic sister chromatid cohesionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376Biological Processimmune system processInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11254H4; histone H4-Transportersko02000deepkoala
Chromosome and associated proteinsko03036deepkoala

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