Detailed information of Aala_g1849.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG1671312.1, LINE-1 retrotransposable element ORF2 protein [Nymphon striatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q8BTM8Filamin-A OS=Mus musculus OX=10090 GN=Flna PE=1 SV=5

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF06390NESP55Neuroendocrine-specific golgi protein P55 (NESP55)FamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF08385DHC_N1Dynein heavy chain, N-terminal region 1FamilyInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR009434FamilyNeuroendocrine secretory protein 55Interproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR044801FamilyFilamin familyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR013594DomainDynein heavy chain, tailInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR38537JITTERBUG, ISOFORM NInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0071107Biological Processresponse to parathyroid hormoneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

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