Detailed information of Aala_g1851.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAJ8031437.1, hypothetical protein HOLleu_24625 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q91DM0Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF02023SCANSCAN domainDomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051070FamilyNF-kappa-B InhibitorInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR001873FamilyEpithelial sodium channelInterproscan
IPR003309DomainSCAN domainInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR050182FamilyCytochrome P450 family 2Interproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR001452DomainSH3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46680NF-KAPPA-B INHIBITOR ALPHAInterproscan
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR24300CYTOCHROME P450 508A4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007253Biological Processcytoplasmic sequestering of NF-kappaBInterproscan
GO:0051059Molecular FunctionNF-kappaB bindingInterproscan
GO:0071356Biological Processcellular response to tumor necrosis factorInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006082Biological Processorganic acid metabolic processInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0016712Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygenInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan

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