Detailed information of Aala_g1855.t1 in Alatina alata

Genomic Location: :...
NR annotation: HCX22453.1, hypothetical protein [Cytophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
O43390Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF18360hnRNP_Q_AcDHeterogeneous nuclear ribonucleoprotein Q acidic domainDomainInterproscan
PF00668CondensationCondensation domainFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR010061FamilyMethylmalonate-semialdehyde dehydrogenaseInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR006535FamilyHnRNP R/Q splicing factorInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR041337DomainHeterogeneous nuclear ribonucleoprotein Q acidic domainInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR052058FamilyAlcohol O-acetyltransferase-related proteinInterproscan
IPR001242DomainCondensation domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR051714FamilyCCHC-type Zinc Finger Nucleic Acid BindingInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43866MALONATE-SEMIALDEHYDE DEHYDROGENASEInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21245HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINInterproscan
PTHR10340SPHINGOMYELIN PHOSPHODIESTERASEInterproscan
PTHR28037ALCOHOL O-ACETYLTRANSFERASE 1-RELATEDInterproscan
PTHR23002ZINC FINGER CCHC DOMAIN CONTAINING PROTEINInterproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004491Molecular Functionmethylmalonate-semialdehyde dehydrogenase (acylating, NAD) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006574Biological Processvaline catabolic processInterproscan
GO:0018478Molecular Functionmalonate-semialdehyde dehydrogenase (acetylating) activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:2000767Biological Processpositive regulation of cytoplasmic translationInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan

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