Gene detail

Detailed information of Aala_g1861.t1 in Alatina alata

Genomic Location: :...
NR annotation: EDO43854.1, predicted protein, partial [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q62656	Receptor-type tyrosine-protein phosphatase zeta OS=Rattus norvegicus OX=10116 GN=Ptprz1 PE=1 SV=1
B9EKR1	Receptor-type tyrosine-protein phosphatase zeta OS=Mus musculus OX=10090 GN=Ptprz1 PE=1 SV=1
B0X4T2	Putative receptor-type tyrosine-protein phosphatase mosPTP-1 OS=Culex quinquefasciatus OX=7176 GN=CpipJ_CPIJ014098 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00890	FAD_binding_2	FAD binding domain	Family	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF00199	Catalase	Catalase	Domain	Interproscan
PF01094	ANF_receptor	Receptor family ligand binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR030664	Family	FAD-dependent oxidoreductase SdhA/FrdA/AprA	Interproscan
IPR003952	Binding_site	Fumarate reductase/succinate dehydrogenase, FAD-binding site	Interproscan
IPR003953	Domain	FAD-dependent oxidoreductase 2, FAD binding domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR050348	Family	Protein-Tyrosine Phosphatase	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR033195	Family	Glycine/inosamine-phosphate amidinotransferase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR018028	Family	Catalase, mono-functional, haem-containing	Interproscan
IPR020835	Homologous_superfamily	Catalase superfamily	Interproscan
IPR002226	Binding_site	Catalase haem-binding site	Interproscan
IPR011614	Domain	Catalase core domain	Interproscan
IPR028082	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR000337	Family	GPCR, family 3	Interproscan
IPR050726	Family	Metabotropic Glutamate Receptor	Interproscan
IPR001828	Domain	Receptor, ligand binding region	Interproscan
IPR035901	Homologous_superfamily	GIY-YIG endonuclease superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR000305	Domain	GIY-YIG endonuclease	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR19134	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan
PTHR10488	GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL	Interproscan
PTHR11465	CATALASE	Interproscan
PTHR24060	METABOTROPIC GLUTAMATE RECEPTOR	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR11476	HISTIDYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000104	Molecular Function	succinate dehydrogenase activity	Interproscan
GO:0005749	Cellular Component	obsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	Interproscan
GO:0006121	Biological Process	mitochondrial electron transport, succinate to ubiquinone	Interproscan
GO:0008177	Molecular Function	succinate dehydrogenase (quinone) activity	Interproscan
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0015067	Molecular Function	amidinotransferase activity	Interproscan
GO:0004096	Molecular Function	catalase activity	Interproscan
GO:0006979	Biological Process	response to oxidative stress	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0042542	Biological Process	response to hydrogen peroxide	Interproscan
GO:0042744	Biological Process	hydrogen peroxide catabolic process	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0001640	Molecular Function	adenylate cyclase inhibiting G protein-coupled glutamate receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004821	Molecular Function	histidine-tRNA ligase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006427	Biological Process	histidyl-tRNA aminoacylation	Interproscan
GO:0032543	Biological Process	mitochondrial translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00416	QCR6, UQCRH; ubiquinol-cytochrome c reductase subunit 6	-	Non-alcoholic fatty liver disease	ko04932	deepkoala