Detailed information of Aala_g1866.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028412374.1, uncharacterized protein K02A2.6-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BN59La-related protein 6 OS=Mus musculus OX=10090 GN=Larp6 PE=1 SV=1
Q9BRS8La-related protein 6 OS=Homo sapiens OX=9606 GN=LARP6 PE=1 SV=1
Q94A38La-related protein 6A OS=Arabidopsis thaliana OX=3702 GN=LARP6A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06418CTP_synth_NCTP synthase N-terminusDomainInterproscan
PF04685DUF608Glycosyl-hydrolase family 116, catalytic regionRepeatInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF05383LaLa domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017456DomainCTP synthase, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR004468FamilyCTP synthaseInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006775DomainGlycosyl-hydrolase family 116, catalytic regionInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR002344FamilyLupus La proteinInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11550CTP SYNTHASEInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003883Molecular FunctionCTP synthase activityInterproscan
GO:0006221Biological Processpyrimidine nucleotide biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006241Biological ProcessCTP biosynthetic processInterproscan
GO:0019856Biological Processpyrimidine nucleobase biosynthetic processInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan
GO:0097268Cellular ComponentcytoophidiumInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005844Cellular Componentobsolete polysomeInterproscan

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