Detailed information of Aala_g1868.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_006813065.1, PREDICTED: titin-like [Saccoglossus kowalevskii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O94875Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SORBS2 PE=1 SV=3
Q3UTJ2Sorbin and SH3 domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sorbs2 PE=1 SV=2
O35413Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Sorbs2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilybHLH
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF02469FasciclinFasciclin domainDomainInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR052591FamilyCalcium-Dependent Signaling ProteinInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR050670FamilySignal Transducing Adapter MoleculeInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR052446FamilyB-cell PI3K Activation and Signaling AdaptersInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR036378Homologous_superfamilyFAS1 domain superfamilyInterproscan
IPR000782DomainFAS1 domainInterproscan
IPR050904FamilyCell adhesion and biosynthesis-related proteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23064TROPONINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR45929JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULEInterproscan
PTHR16267BANK1/PIK3AP1 FAMILY MEMBERInterproscan
PTHR10900PERIOSTIN-RELATEDInterproscan
PTHR45703DYNEIN HEAVY CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005102Molecular Functionsignaling receptor bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0050839Molecular Functioncell adhesion molecule bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

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