Detailed information of Aala_g1876.t1 in Alatina alata

Genomic Location: :...
NR annotation: PFX12980.1, hypothetical protein AWC38_SpisGene22983 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF05033Pre-SETPre-SET motifFamilyInterproscan
PF01061ABC2_membraneABC-2 type transporterFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR045120FamilySUN domain-containing Suco/Slp1-likeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR007728DomainPre-SET domainInterproscan
IPR051357FamilyHistone-lysine N-methyltransferase SUVAR3-9Interproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR050352FamilyATP-binding cassette subfamily G transportersInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45667S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR12953MEMBRANE PROTEIN CH1 RELATEDInterproscan
PTHR45660HISTONE-LYSINE N-METHYLTRANSFERASE SETMARInterproscan
PTHR48041ABC TRANSPORTER G FAMILY MEMBER 28Interproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000095Molecular FunctionS-adenosyl-L-methionine transmembrane transporter activityInterproscan
GO:0005743Cellular Componentmitochondrial inner membraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034975Biological Processprotein folding in endoplasmic reticulumInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0016571Biological Processobsolete histone methylationInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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