Detailed information of Aala_g1881.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047502455.1, uncharacterized protein LOC125047952 [Penaeus chinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20206Tra1_ringTra1 HEAT repeat ring regionRepeatInterproscan
PF14945LLC1Normal lung function maintenance, Low in Lung Cancer 1 proteinFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF02213GYFGYF domainDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan
IPR046805RepeatTra1, HEAT repeat ring regionInterproscan
IPR020339FamilyCiliary microtubule inner protein 1-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR035445Homologous_superfamilyGYF-like domain superfamilyInterproscan
IPR003169DomainGYF domainInterproscan
IPR039905FamilyCD2 antigen cytoplasmic tail-binding protein 2/Lin1Interproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050569FamilyTrace Amine-Associated ReceptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan
PTHR31909CHROMOSOME 20 ORF85 FAMILY MEMBERInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13138PROTEIN LIN1Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13099CD2BP2, PPP1R59; CD2 antigen cytoplasmic tail-binding protein 2-Spliceosomeko03041deepkoala

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