Detailed information of Aala_g1891.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_025080420.1, zinc finger MYM-type protein 1-like [Pomacea canaliculata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5U4Q9Selenocysteine lyase OS=Xenopus tropicalis OX=8364 GN=scly PE=2 SV=2
Q66IQ6Selenocysteine lyase OS=Xenopus laevis OX=8355 GN=scly PE=2 SV=1
A2VDS1Selenocysteine lyase OS=Bos taurus OX=9913 GN=SCLY PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00266Aminotran_5Aminotransferase class-VDomainInterproscan
PF01221Dynein_lightDynein light chain type 1 DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037363FamilySec13/Seh1 familyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR000192DomainAminotransferase class V domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR014010DomainREJ domainInterproscan
IPR001372FamilyDynein light chain, type 1/2Interproscan
IPR037177Homologous_superfamilyDynein light chain superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERInterproscan
PTHR11601CYSTEINE DESULFURYLASE FAMILY MEMBERInterproscan
PTHR45749-Interproscan
PTHR11886DYNEIN LIGHT CHAINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0032527Biological Processprotein exit from endoplasmic reticulumInterproscan
GO:0090114Biological ProcessCOPII-coated vesicle buddingInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10412DNAL4; dynein axonemal light chain 4-Membrane traffickingko04131deepkoala
Cytoskeleton proteinsko04812deepkoala

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