Detailed information of Aala_g1903.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_027221745.1, uncharacterized protein LOC113813890 [Penaeus vannamei]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6P2Q9Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens OX=9606 GN=PRPF8 PE=1 SV=2
Q99PV0Pre-mRNA-processing-splicing factor 8 OS=Mus musculus OX=10090 GN=Prpf8 PE=1 SV=2
P34369Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans OX=6239 GN=prp-8 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08082PRO8NTPRO8NT (NUC069), PrP8 N-terminal domainDomainInterproscan
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR012591DomainPRO8NT domainInterproscan
IPR027652FamilyPre-mRNA-processing-splicing factor 8Interproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR003280FamilyTwo pore domain potassium channelInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR051637FamilyAnkyrin repeat domain-containing protein 49Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR11140PRE-MRNA SPLICING FACTOR PRP8Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33327ENDONUCLEASEInterproscan
PTHR11003POTASSIUM CHANNEL, SUBFAMILY KInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000244Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0017070Molecular FunctionU6 snRNA bindingInterproscan
GO:0030619Molecular FunctionU1 snRNA bindingInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan
GO:0030623Molecular FunctionU5 snRNA bindingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097157Molecular Functionpre-mRNA intronic bindingInterproscan
GO:0005267Molecular Functionpotassium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015271Molecular Functionoutward rectifier potassium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022841Molecular Functionpotassium ion leak channel activityInterproscan
GO:0030322Biological Processstabilization of membrane potentialInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05670ABCC13; ATP-binding cassette, subfamily C (CFTR/MRP), member 13-Transportersko02000deepkoala

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