Detailed information of Aala_g1905.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002168543.2, transcription initiation factor TFIID subunit 6 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P49848Transcription initiation factor TFIID subunit 6 OS=Homo sapiens OX=9606 GN=TAF6 PE=1 SV=1
P49847Transcription initiation factor TFIID subunit 6 OS=Drosophila melanogaster OX=7227 GN=Taf6 PE=1 SV=2
Q62311Transcription initiation factor TFIID subunit 6 OS=Mus musculus OX=10090 GN=Taf6 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF07571TAF6_CTAF6 C-terminal HEAT repeat domainRepeatInterproscan
PF02969TAFTATA box binding protein associated factor (TAF)DomainInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR004823DomainTATA box binding protein associated factor (TAF), histone-like fold domainInterproscan
IPR046344Homologous_superfamilyTAF6, C-terminal HEAT repeat domain superfamilyInterproscan
IPR037796FamilyTranscription initiation factor TFIID subunit 6Interproscan
IPR011442DomainTAF6, C-terminal HEAT repeat domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026919FamilyAdhesion G-protein coupled receptor V1Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036599Homologous_superfamilyDNA ligase, ATP-dependent, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15735FCH AND DOUBLE SH3 DOMAINS PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45786DNA BINDING PROTEIN-LIKEInterproscan
PTHR10221TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6Interproscan
PTHR10492UNCHARACTERIZEDInterproscan
PTHR46682ADHESION G-PROTEIN COUPLED RECEPTOR V1Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005669Cellular Componenttranscription factor TFIID complexInterproscan
GO:0016251Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0046695Cellular ComponentSLIK (SAGA-like) complexInterproscan
GO:0051123Biological ProcessRNA polymerase II preinitiation complex assemblyInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007194Biological Processnegative regulation of adenylate cyclase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan

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