Detailed information of Aala_g1912.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_013882272.1, PREDICTED: general transcription factor II-I repeat domain-containing protein 2A-like [Austrofundulus limnaeus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q86UP8General transcription factor II-I repeat domain-containing protein 2A OS=Homo sapiens OX=9606 GN=GTF2IRD2 PE=1 SV=3
Q6EKJ0General transcription factor II-I repeat domain-containing protein 2B OS=Homo sapiens OX=9606 GN=GTF2IRD2B PE=1 SV=1
A4IFA3General transcription factor II-I repeat domain-containing protein 2 OS=Bos taurus OX=9913 GN=GTF2IRD2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF17862AAA_lid_3AAA+ lid domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF00331Glyco_hydro_10Glycosyl hydrolase family 10DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR045199FamilyATPase family AAA domain-containing protein ATAD2-likeInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR003960Conserved_siteATPase, AAA-type, conserved siteInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR041569DomainAAA ATPase, AAA+ lid domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR050143FamilyTripartite motif-containingInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003613DomainU-box domainInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR001000DomainGlycoside hydrolase family 10 domainInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR044846FamilyGlycoside hydrolase family 10Interproscan
IPR040398FamilyCCR4-NOT transcription complex subunit 1Interproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR23069AAA DOMAIN-CONTAININGInterproscan
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11699ALDEHYDE DEHYDROGENASE-RELATEDInterproscan
PTHR31490GLYCOSYL HYDROLASEInterproscan
PTHR13162CCR4-NOT TRANSCRIPTION COMPLEXInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR36162-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0004029Molecular Functionaldehyde dehydrogenase (NAD+) activityInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan

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