Detailed information of Aala_g1916.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_039259580.1, SCAN domain-containing protein 3-like [Styela clava]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZ13Protein FAM200C OS=Homo sapiens OX=9606 GN=FAM200C PE=1 SV=1
A4Z945Protein FAM200C OS=Bos taurus OX=9913 GN=FAM200C PE=2 SV=1
A4Z943Zinc finger BED domain-containing protein 5 OS=Bos taurus OX=9913 GN=ZBED5 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF00909Ammonium_transpAmmonium Transporter FamilyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR006580DomainZinc finger, TTF-typeInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR024041DomainAmmonium transporter AmtB-like domainInterproscan
IPR029020Homologous_superfamilyAmmonium/urea transporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR23159CENTROSOMAL PROTEIN 2Interproscan
PTHR45749-Interproscan
PTHR11730AMMONIUM TRANSPORTERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0008519Molecular Functionammonium channel activityInterproscan
GO:0072488Biological Processammonium transmembrane transportInterproscan
GO:0097272Biological Processammonium homeostasisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03320amt, AMT, MEP; ammonium transporter, Amt family-Transportersko02000deepkoala

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