Detailed information of Aala_g1920.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH2215787.1, jg22702, partial [Pararge aegeria aegeria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NA75Trimeric intracellular cation channel type 1B.1 OS=Caenorhabditis elegans OX=6239 GN=tric-1B.1 PE=1 SV=2
Q9NA73Trimeric intracellular cation channel type 1B.2 OS=Caenorhabditis elegans OX=6239 GN=tric-1B.2 PE=1 SV=2
Q7ZVP8Trimeric intracellular cation channel type B OS=Danio rerio OX=7955 GN=tmem38b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF14728PHTB1_CPTHB1 C-terminusFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF12202OSR1_COxidative-stress-responsive kinase 1 C-terminal domainDomainInterproscan
PF02838Glyco_hydro_20bGlycosyl hydrolase family 20, domain 2DomainInterproscan
PF00728Glyco_hydro_20Glycosyl hydrolase family 20, catalytic domainDomainInterproscan
PF14370Topo_C_assocC-terminal topoisomerase domainFamilyInterproscan
PF01028Topoisom_IEukaryotic DNA topoisomerase I, catalytic coreDomainInterproscan
PF05197TRICTRIC channelFamilyInterproscan
PF00201UDPGTUDP-glucoronosyl and UDP-glucosyl transferaseFamilyInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR006578DomainMADF domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR026511FamilyParathyroid hormone-responsive B1Interproscan
IPR028074DomainPTHB1, C-terminal domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027065FamilyLon proteaseInterproscan
IPR024678DomainSerine/threonine-protein kinase OSR1/WNK, CCT domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR015882DomainBeta-hexosaminidase, bacterial type, N-terminalInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR029018Homologous_superfamilyBeta-hexosaminidase-like, domain 2Interproscan
IPR015883DomainGlycoside hydrolase family 20, catalytic domainInterproscan
IPR025705FamilyBeta-hexosaminidaseInterproscan
IPR001631FamilyDNA topoisomerase IInterproscan
IPR013499DomainDNA topoisomerase I, eukaryotic-typeInterproscan
IPR014727Homologous_superfamilyDNA topoisomerase I, catalytic core, alpha/beta subdomainInterproscan
IPR025834DomainTopoisomerase I C-terminal domainInterproscan
IPR013500DomainDNA topoisomerase I, catalytic core, eukaryotic-typeInterproscan
IPR014711Homologous_superfamilyDNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-typeInterproscan
IPR051062FamilyDNA topoisomerase IBInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR052109FamilySerine/Arginine Repetitive Matrix Domain-Containing ProteinInterproscan
IPR007866FamilyTRIC channelInterproscan
IPR002213FamilyUDP-glucuronosyl/UDP-glucosyltransferaseInterproscan
IPR001128FamilyCytochrome P450Interproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21505UNCHARACTERIZEDInterproscan
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR20991PARATHYROID HORMONE-RESPONSIVE B1 GENEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR43718LON PROTEASEInterproscan
PTHR22600BETA-HEXOSAMINIDASEInterproscan
PTHR10290DNA TOPOISOMERASE IInterproscan
PTHR34755SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATEDInterproscan
PTHR12454TRIMERIC INTRACELLULAR CATION CHANNELInterproscan
PTHR24289STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASEInterproscan
PTHR22954RETROVIRAL PROTEASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0034464Cellular ComponentBBSomeInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0004176Molecular FunctionATP-dependent peptidase activityInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005759Cellular Componentmitochondrial matrixInterproscan
GO:0006515Biological Processprotein quality control for misfolded or incompletely synthesized proteinsInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0030163Biological Processprotein catabolic processInterproscan
GO:0051131Biological Processchaperone-mediated protein complex assemblyInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0004563Molecular Functionbeta-N-acetylhexosaminidase activityInterproscan
GO:0030203Biological Processglycosaminoglycan metabolic processInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003917Molecular FunctionDNA topoisomerase type I (single strand cut, ATP-independent) activityInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0007059Biological Processchromosome segregationInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005267Molecular Functionpotassium channel activityInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0008194Molecular FunctionUDP-glycosyltransferase activityInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan

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