Detailed information of Aala_g1935.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAB4005564.1, uncharacterized protein K02A2.6-like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q86UP8General transcription factor II-I repeat domain-containing protein 2A OS=Homo sapiens OX=9606 GN=GTF2IRD2 PE=1 SV=3
Q6EKJ0General transcription factor II-I repeat domain-containing protein 2B OS=Homo sapiens OX=9606 GN=GTF2IRD2B PE=1 SV=1
A4IFA3General transcription factor II-I repeat domain-containing protein 2 OS=Bos taurus OX=9913 GN=GTF2IRD2 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyRHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13936HTH_38Helix-turn-helix domainDomainInterproscan
PF01498HTH_Tnp_Tc3_2TransposaseFamilyInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF00554RHD_DNA_bindRel homology DNA-binding domainDomainInterproscan
PF02037SAPSAP domainDomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR025246DomainTransposase IS30-like HTH domainInterproscan
IPR002492DomainTransposase, Tc1-likeInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000366FamilyGPCR fungal pheromone mating factor, STE2Interproscan
IPR011759DomainCytochrome C oxidase subunit II, transmembrane domainInterproscan
IPR037059Homologous_superfamilyRel homology domain (RHD), DNA-binding domain superfamilyInterproscan
IPR000451FamilyNF-kappa-B/DorsalInterproscan
IPR011539DomainRel homology domain, DNA-binding domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002052Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan
IPR003034DomainSAP domainInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR044978FamilyDnaJ homologue subfamily C, GRV2/DNAJC13Interproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR24169NUCLEAR FACTOR NF-KAPPA-B PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR36983DNAJ HOMOLOG SUBFAMILY C MEMBER 13Interproscan
PTHR45598PROTEIN CBG11839-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006313Biological ProcessDNA transpositionInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004932Molecular Functionmating-type factor pheromone receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0022900Biological Processelectron transport chainInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0010008Cellular Componentendosome membraneInterproscan
GO:2000641Biological Processregulation of early endosome to late endosome transportInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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