Gene detail

Detailed information of Aala_g1940.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012566299.1, zinc metalloproteinase nas-13 isoform X2 [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q20191	Zinc metalloproteinase nas-13 OS=Caenorhabditis elegans OX=6239 GN=nas-13 PE=2 SV=5
P55115	Zinc metalloproteinase nas-15 OS=Caenorhabditis elegans OX=6239 GN=nas-15 PE=2 SV=2
P55112	Zinc metalloproteinase nas-4 OS=Caenorhabditis elegans OX=6239 GN=nas-4 PE=2 SV=4

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|GAT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03127	GAT	GAT domain	Domain	Interproscan
PF18308	GGA_N-GAT	N-terminal extension of GAT domain	Family	Interproscan
PF05030	SSXT	SSXT protein (N-terminal region)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR004210	Domain	BESS motif	Interproscan
IPR004152	Domain	GAT domain	Interproscan
IPR027422	Family	ADP-ribosylation factor-binding protein GGA1-3	Interproscan
IPR038425	Homologous_superfamily	GAT domain superfamily	Interproscan
IPR041198	Domain	N-terminal extension of GAT domain	Interproscan
IPR007726	Domain	SS18, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR10127	DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR45905	GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0005802	Cellular Component	trans-Golgi network	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0006893	Biological Process	Golgi to plasma membrane transport	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0034394	Biological Process	protein localization to cell surface	Interproscan