Detailed information of Aala_g1942.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAH3032690.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O73770Protein DGCR6 OS=Gallus gallus OX=9031 GN=DGCR6 PE=2 SV=1
Q14129Protein DGCR6 OS=Homo sapiens OX=9606 GN=DGCR6 PE=1 SV=3
Q9BY27Protein DGCR6L OS=Homo sapiens OX=9606 GN=DGCR6L PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00817IMSimpB/mucB/samB familyFamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13961DUF4219Domain of unknown function (DUF4219)DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF03662Glyco_hydro_79nGlycosyl hydrolase family 79, N-terminal domain DomainInterproscan
PF07324DGCR6DiGeorge syndrome critical region 6 (DGCR6) proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001126DomainUmuC domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001810DomainF-box domainInterproscan
IPR045118FamilyF-box only protein FBXO9/FBXO48Interproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR025314DomainDomain of unknown function DUF4219Interproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR005199FamilyGlycoside hydrolase, family 79Interproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR010849FamilyGonadal familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46404DNA POLYMERASE IOTAInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR12874F-BOX ONLY PROTEIN 48-RELATEDInterproscan
PTHR45749-Interproscan
PTHR47481-Interproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46145HEPARANASEInterproscan
PTHR13054DIGEORGE SYNDROME CRITICAL REGION 6 DGCR6 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006281Biological ProcessDNA repairInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0019985Biological Processtranslesion synthesisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016798Molecular Functionhydrolase activity, acting on glycosyl bondsInterproscan

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