Gene detail

Detailed information of Aala_g1943.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020619847.1, hepatic leukemia factor-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q16534	Hepatic leukemia factor OS=Homo sapiens OX=9606 GN=HLF PE=1 SV=1
Q8BW74	Hepatic leukemia factor OS=Mus musculus OX=10090 GN=Hlf PE=2 SV=1
Q64709	Hepatic leukemia factor OS=Rattus norvegicus OX=10116 GN=Hlf PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13714	PEP_mutase	Phosphoenolpyruvate phosphomutase	Domain	Interproscan
PF02197	RIIa	Regulatory subunit of type II PKA R-subunit	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF07716	bZIP_2	Basic region leucine zipper	Coiled-coil	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015813	Homologous_superfamily	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily	Interproscan
IPR040442	Homologous_superfamily	Pyruvate kinase-like domain superfamily	Interproscan
IPR039556	Domain	ICL/PEPM domain	Interproscan
IPR003117	Domain	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR040223	Family	PAR basic leucine zipper protein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35450	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR42905	PHOSPHOENOLPYRUVATE CARBOXYLASE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR11988	THYROTROPH EMBRYONIC FACTOR RELATED	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR22955	RETROTRANSPOSON	Interproscan
PTHR33332	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09057	HLF; hepatic leukemia factor	-	Transcription factors	ko03000	deepkoala