Detailed information of Aala_g1949.t1 in Alatina alata

Genomic Location: :...
NR annotation: RUA04113.1, hypothetical protein DSY43_07085 [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
P21329RNA-directed DNA polymerase from mobile element jockey OS=Drosophila funebris OX=7221 GN=jockeypol PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF12762DDE_Tnp_IS1595ISXO2-like transposase domainDomainInterproscan
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF20826PHD_5PhD finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR043509DomainBrdt, bromodomain, repeat IIInterproscan
IPR050935FamilyBromodomain-containing chromatin readerInterproscan
IPR001487DomainBromodomainInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR024445DomainISXO2-like transposase domainInterproscan
IPR053164FamilyIS1016-like transposaseInterproscan
IPR050704FamilyOTU domain-containing ubiquitin thioesteraseInterproscan
IPR003323DomainOTU domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINSInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47163DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEINInterproscan
PTHR12419OTU DOMAIN CONTAINING PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46462UPSET, ISOFORM AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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