Gene detail

Detailed information of Aala_g195.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020481890.1, uncharacterized protein LOC109976004 isoform X3 [Labrus bergylta]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q09575	Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans OX=6239 GN=K02A2.6 PE=4 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF17919	RT_RNaseH_2	RNase H-like domain found in reverse transcriptase	Domain	Interproscan
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR002052	Conserved_site	DNA methylase, N-6 adenine-specific, conserved site	Interproscan
IPR041577	Domain	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR33327	ENDONUCLEASE	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0032259	Biological Process	methylation	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K25228	APC15, ANAPC15; anaphase-promoting complex subunit 15	-	Chromosome and associated proteins	ko03036	deepkoala