Detailed information of Aala_g1955.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_047122830.1, echinoderm microtubule-associated protein-like 6 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6ZMW3Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens OX=9606 GN=EML6 PE=1 SV=2
Q5SQM0Echinoderm microtubule-associated protein-like 6 OS=Mus musculus OX=10090 GN=Eml6 PE=2 SV=1
Q05BV3Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens OX=9606 GN=EML5 PE=1 SV=3
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Ubiquitin FamilyUBD|Other|Beta-prp
Transcription Factors FamilyTHAP
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF13613HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan
PF02181FH2Formin Homology 2 DomainFamilyInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR006578DomainMADF domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027805DomainTransposase, Helix-turn-helix domainInterproscan
IPR051425FamilyFormin HomologyInterproscan
IPR015425DomainFormin, FH2 domainInterproscan
IPR042201Homologous_superfamilyFormin, FH2 domain superfamilyInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR052638FamilyPiggyBac transposable element-derivedInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24379KRAB AND ZINC FINGER DOMAIN-CONTAININGInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR10024SYNAPTOTAGMINInterproscan
PTHR13720WD-40 REPEAT PROTEINInterproscan
PTHR23080THAP DOMAIN PROTEINInterproscan
PTHR45725FORMIN HOMOLOGY 2 FAMILY MEMBERInterproscan
PTHR46780PROTEIN EVA-1Interproscan
PTHR31511PROTEIN CBG23764Interproscan
PTHR47055DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0001786Molecular Functionphosphatidylserine bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0014059Biological Processregulation of dopamine secretionInterproscan
GO:0017156Biological Processcalcium-ion regulated exocytosisInterproscan
GO:0017158Biological Processregulation of calcium ion-dependent exocytosisInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

TOP