Detailed information of Aala_g196.t1 in Alatina alata

Genomic Location: :...
NR annotation: WP_267995002.1, reverse transcriptase domain-containing protein, partial [Actinobacillus pleuropneumoniae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
Q60649Mitochondrial disaggregase OS=Mus musculus OX=10090 GN=Clpb PE=1 SV=1
Q9H078Mitochondrial disaggregase OS=Homo sapiens OX=9606 GN=CLPB PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF14291DUF4371Domain of unknown function (DUF4371)FamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF14244Retrotran_gag_3gag-polypeptide of LTR copia-typeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR025398DomainDomain of unknown function DUF4371Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR050130FamilyATP-dependent Clp protease/Chaperone ClpA/ClpBInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR029472DomainRetrotransposon Copia-like, N-terminalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11638ATP-DEPENDENT CLP PROTEASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0034605Biological Processcellular response to heatInterproscan

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