Detailed information of Aala_g1964.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAE8728675.1, Beta-glucosidase 46 [Hibiscus syriacus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P92519Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF09177Syntaxin-6_NSyntaxin 6, N-terminalDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR015260DomainSyntaxin 6, N-terminalInterproscan
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR045242FamilySyntaxinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR016346FamilyGuanine nucleotide-binding protein, beta subunitInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19957SYNTAXINInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19850GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0048193Biological ProcessGolgi vesicle transportInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:0048278Biological Processvesicle dockingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005834Cellular Componentheterotrimeric G-protein complexInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0007212Biological ProcessG protein-coupled dopamine receptor signaling pathwayInterproscan
GO:0030159Molecular Functionsignaling receptor complex adaptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08498STX6; syntaxin 6-Prokaryotic defense systemko02048deepkoala
Membrane traffickingko04131deepkoala

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