Detailed information of Aala_g1976.t1 in Alatina alata

Genomic Location: :...
NR annotation: KXJ17530.1, LINE-1 retrotransposable element ORF2 protein [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17171GST_C_6Glutathione S-transferase, C-terminal domainDomainInterproscan
PF01852STARTSTART domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17035BETBromodomain extra-terminal - transcription regulationDomainInterproscan
PF00075RNase_HRNase HDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050931FamilyMitochondrial Protein Transport MetaxinInterproscan
IPR033468DomainMetaxin, glutathione S-transferase domainInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR051860FamilyPlasmodium Circumsporozoite Invasion ProteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR002913DomainSTART domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR023393Homologous_superfamilySTART-like domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR027353DomainNET domainInterproscan
IPR050935FamilyBromodomain-containing chromatin readerInterproscan
IPR038336Homologous_superfamilyNET domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002156DomainRibonuclease H domainInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12289METAXIN RELATEDInterproscan
PTHR44826SPORE COAT PROTEIN SP85Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINSInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008289Molecular Functionlipid bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004523Molecular FunctionRNA-DNA hybrid ribonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K23790GSTP; glutathione S-transferase PEC:2.5.1.18
Prokaryotic defense systemko02048deepkoala
Transportersko02000deepkoala

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