Detailed information of Aala_g1977.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI4463942.1, transposable element-related [Holotrichia oblita]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9P225Dynein axonemal heavy chain 2 OS=Homo sapiens OX=9606 GN=DNAH2 PE=1 SV=3
P0C6F1Dynein axonemal heavy chain 2 OS=Mus musculus OX=10090 GN=Dnah2 PE=1 SV=1
Q9MBF8Dynein-1-beta heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii OX=3055 GN=DHC10 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF13936HTH_38Helix-turn-helix domainDomainInterproscan
PF18199Dynein_CDynein heavy chain C-terminal domainDomainInterproscan
PF18198AAA_lid_11Dynein heavy chain AAA lid domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR050359FamilyBasic helix-loop-helix transcription factorsInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR052338FamilyTransposase_5Interproscan
IPR025246DomainTransposase IS30-like HTH domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR042219Homologous_superfamilyDynein heavy chain AAA lid domain superfamilyInterproscan
IPR041228DomainDynein heavy chain, C-terminal domainInterproscan
IPR041658DomainDynein heavy chain AAA lid domainInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR014010DomainREJ domainInterproscan
IPR052752FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16213UNCHARACTERIZEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR19290BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATEDInterproscan
PTHR24028CADHERIN-87AInterproscan
PTHR23022TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR45703DYNEIN HEAVY CHAINInterproscan
PTHR19871BETA TRANSDUCIN-RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0048741Biological Processskeletal muscle fiber developmentInterproscan
GO:0055074Biological Processcalcium ion homeostasisInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007423Biological Processsensory organ developmentInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0061564Biological Processaxon developmentInterproscan
GO:0070888Molecular FunctionE-box bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11631bceA, vraD; bacitracin transport system ATP-binding protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala
Transportersko02000deepkoala

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