Detailed information of Aala_g1979.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_054771728.1, lymphocyte-specific helicase-like [Lytechinus pictus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NRZ9Lymphoid-specific helicase OS=Homo sapiens OX=9606 GN=HELLS PE=1 SV=1
Q60848Lymphocyte-specific helicase OS=Mus musculus OX=10090 GN=Hells PE=1 SV=2
Q9XFH4ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana OX=3702 GN=DDM1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09777OSTMP1Osteopetrosis-associated transmembrane protein 1 precursorFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF01401Peptidase_M2Angiotensin-converting enzymeFamilyInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF14893PNMAPNMAFamilyInterproscan
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan
PF12756zf-C2H2_2C2H2 type zinc-finger (2 copies)FamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR019172FamilyOsteopetrosis-associated transmembrane protein 1 precursorInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR001548FamilyPeptidase M2, peptidyl-dipeptidase AInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR040025FamilyZinc finger protein 622/Rei1/Reh1Interproscan
IPR041661DomainZN622/Rei1/Reh1, zinc finger C2H2-typeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10514ANGIOTENSIN-CONVERTING ENZYMEInterproscan
PTHR47161LYMPHOID-SPECIFIC HELICASEInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19963CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13182ZINC FINGER PROTEIN 622Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008241Molecular Functionpeptidyl-dipeptidase activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005721Cellular Componentpericentric heterochromatinInterproscan
GO:0006306Biological Processobsolete DNA methylationInterproscan
GO:0006346Biological ProcessDNA methylation-dependent constitutive heterochromatin formationInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0031508Biological Processpericentric heterochromatin formationInterproscan
GO:0046651Biological Processlymphocyte proliferationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14816REI1; pre-60S factor REI1-Ribosome biogenesisko03009deepkoala

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