Detailed information of Aala_g1980.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP4484349.1, hypothetical protein [Flavobacteriaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DBN9Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1 SV=1
Q66HG7Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59 PE=2 SV=1
Q5T1V6Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04199CyclasePutative cyclaseFamilyInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004244FamilyTransposase, L1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR037175Homologous_superfamilyKynurenine formamidase superfamilyInterproscan
IPR007325FamilyKynurenine formamidase/cyclase-likeInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan
PTHR31118CYCLASE-LIKE PROTEIN 2Interproscan
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0004061Molecular Functionarylformamidase activityInterproscan
GO:0019441Biological Processtryptophan catabolic process to kynurenineInterproscan
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19925TNP2; nuclear transition protein 2-Membrane traffickingko04131deepkoala

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