Gene detail

Detailed information of Aala_g1981.t1 in Alatina alata

Genomic Location: :...
NR annotation: CAF3870535.1, unnamed protein product, partial [Rotaria sp. Silwood1]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P43245	ATP-dependent translocase ABCB1 OS=Rattus norvegicus OX=10116 GN=Abcb1 PE=2 SV=1
P06795	ATP-dependent translocase ABCB1 OS=Mus musculus OX=10090 GN=Abcb1b PE=1 SV=1
P21448	ATP-dependent translocase ABCB1 OS=Cricetulus griseus OX=10029 GN=ABCB1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	PAX
Transcription Factors Family	PAX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR051068	Family	Major Facilitator Superfamily Domain-Containing Protein	Interproscan
IPR035985	Homologous_superfamily	Ubiquitin-activating enzyme	Interproscan
IPR009091	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24247	5-HYDROXYTRYPTAMINE RECEPTOR	Interproscan
PTHR24222	ABC TRANSPORTER B FAMILY	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR23510	INNER MEMBRANE TRANSPORT PROTEIN YAJR	Interproscan
PTHR35317	OS04G0629600 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004993	Molecular Function	G protein-coupled serotonin receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007187	Biological Process	G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	Interproscan
GO:0007268	Biological Process	chemical synaptic transmission	Interproscan
GO:0030425	Cellular Component	dendrite	Interproscan
GO:0030594	Molecular Function	neurotransmitter receptor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0008641	Molecular Function	ubiquitin-like modifier activating enzyme activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan