Detailed information of Aala_g1985.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_031561052.1, thyroid receptor-interacting protein 11-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P04146Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3
P0CV72Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00406ADKAdenylate kinaseDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan
PF12054DUF3535Domain of unknown function (DUF3535)FamilyInterproscan
PF00051KringleKringle domainDomainInterproscan
PF00343PhosphorylaseCarbohydrate phosphorylaseFamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF17903KH_8Krr1 KH1 domainDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000850FamilyAdenylate kinase/UMP-CMP kinaseInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR044972FamilyTATA-binding protein-associated factor Mot1Interproscan
IPR022707DomainMot1, central domainInterproscan
IPR000001DomainKringleInterproscan
IPR018056Conserved_siteKringle, conserved siteInterproscan
IPR050759FamilySerine proteases and regulators with kringle domainsInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR000811FamilyGlycosyl transferase, family 35Interproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR041174DomainKRR1 small subunit processome component, first KH domainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR36498TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172Interproscan
PTHR24261PLASMINOGEN-RELATEDInterproscan
PTHR11468GLYCOGEN PHOSPHORYLASEInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR12826RIBONUCLEASE YInterproscan
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0019205Molecular Functionnucleobase-containing compound kinase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0008184Molecular Functionglycogen phosphorylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005980Biological Processglycogen catabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11884PNO1, DIM2; RNA-binding protein PNO1-Proteasomeko03051deepkoala

TOP