Detailed information of Aala_g1986.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022807373.1, TNF receptor-associated factor 4-like isoform X3 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5MNH7Amino acid decarboxylase lolD2 OS=Epichloe uncinata OX=5050 GN=lolD2 PE=2 SV=1
Q5MNI5Amino acid decarboxylase lolD1 OS=Epichloe uncinata OX=5050 GN=lolD1 PE=2 SV=1
Q9JHU4Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus OX=10090 GN=Dync1h1 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02214BTB_2BTB/POZ domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF02023SCANSCAN domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF02784Orn_Arg_deC_NPyridoxal-dependent decarboxylase, pyridoxal binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR003972FamilyPotassium channel, voltage dependent, Kv1Interproscan
IPR003131DomainPotassium channel tetramerisation-type BTB domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR003309DomainSCAN domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan
IPR053336FamilyRhoptry Surface-Associated ProteinInterproscan
IPR002433FamilyOrnithine decarboxylaseInterproscan
IPR029066Homologous_superfamilyPLP-binding barrelInterproscan
IPR022644DomainOrn/DAP/Arg decarboxylase 2, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11537VOLTAGE-GATED POTASSIUM CHANNELInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR10131TNF RECEPTOR ASSOCIATED FACTORInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46532MALE FERTILITY FACTOR KL5Interproscan
PTHR37320AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUEInterproscan
PTHR11482ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005249Molecular Functionvoltage-gated potassium channel activityInterproscan
GO:0005251Molecular Functiondelayed rectifier potassium channel activityInterproscan
GO:0008076Cellular Componentvoltage-gated potassium channel complexInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0071805Biological Processpotassium ion transmembrane transportInterproscan
GO:0006813Biological Processpotassium ion transportInterproscan
GO:0051260Biological Processprotein homooligomerizationInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0070534Biological Processprotein K63-linked ubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006596Biological Processpolyamine biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004586Molecular Functionornithine decarboxylase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0033387Biological Processputrescine biosynthetic process from ornithineInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04874KCNA1, KV1.1; potassium voltage-gated channel Shaker-related subfamily A member 1-Ion channelsko04040deepkoala

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