Detailed information of Aala_g1988.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI0234680.1, hypothetical protein LSAT2_015021 [Lamellibrachia satsuma]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XK67DNA-directed RNA polymerases I and III subunit RPAC2 OS=Xenopus laevis OX=8355 GN=polr1d PE=3 SV=1
Q1RMG8DNA-directed RNA polymerases I and III subunit RPAC2 OS=Bos taurus OX=9913 GN=POLR1D PE=2 SV=1
P0DPB6DNA-directed RNA polymerases I and III subunit RPAC2 OS=Homo sapiens OX=9606 GN=POLR1D PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13656RNA_pol_L_2RNA polymerase Rpb3/Rpb11 dimerisation domainDomainInterproscan
PF02493MORNMORN repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF03437BtpABtpA familyFamilyInterproscan
PF13606Ank_3Ankyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR053336FamilyRhoptry Surface-Associated ProteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR050449FamilyEphrin receptor tyrosine kinasesInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008193Conserved_siteDNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved siteInterproscan
IPR022905FamilyDNA-directed RNA polymerase subunit Rpo11-likeInterproscan
IPR036603Homologous_superfamilyRNA polymerase, RBP11-like subunitInterproscan
IPR033898FamilyDNA-directed RNA polymerases I and III subunit AC19Interproscan
IPR009025DomainDNA-directed RNA polymerase, RBP11-like dimerisation domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR003409RepeatMORN repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR053064FamilyAnkyrin repeat and MYND domain-containing proteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR005137FamilyMembrane complex biogenesis protein, BtpA familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37320AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUEInterproscan
PTHR46877EPH RECEPTOR A5Interproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR13946DNA-DIRECTED RNA POLYMERASE I,II,IIIInterproscan
PTHR15897ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13491ZCCHC10 PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR21381ZGC:162297Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005005Molecular Functiontransmembrane-ephrin receptor activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030425Cellular ComponentdendriteInterproscan
GO:0048013Biological Processephrin receptor signaling pathwayInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24631ANKMY1, ZMYD13; ankyrin repeat and MYND domain-containing protein 1-Transcription machineryko03021deepkoala
Domain-containing proteins not elsewhere classifiedko04990deepkoala

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