Detailed information of Aala_g1989.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAI8484524.1, hypothetical protein Bbelb_377950 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P10978Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1
P0C2J5Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-LR2 PE=5 SV=1
Q12491Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00837T4_deiodinaseIodothyronine deiodinaseFamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF13976gag_pre-integrsGAG-pre-integrase domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14244Retrotran_gag_3gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF07767Nop53Nop53 (60S ribosomal biogenesis)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000643FamilyIodothyronine deiodinaseInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR025724DomainGAG-pre-integrase domainInterproscan
IPR029472DomainRetrotransposon Copia-like, N-terminalInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR011687FamilyRibosome biogenesis protein Nop53/GLTSCR2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR11781IODOTHYRONINE DEIODINASEInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR14211GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004800Molecular Functionthyroxine 5'-deiodinase activityInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0000027Biological Processribosomal large subunit assemblyInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0008097Molecular Function5S rRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09647IMP1; mitochondrial inner membrane protease subunit 1EC:3.4.21.-
Mitochondrial biogenesisko03029deepkoala

TOP