Detailed information of Aala_g2000.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020912759.1, uncharacterized protein LOC114574205 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P02597Calmodulin, striated muscle OS=Gallus gallus OX=9031 GN=CCM1 PE=3 SV=2
Q41420Putative calmodulin-3 (Fragment) OS=Solanum tuberosum OX=4113 GN=PCM3 PE=5 SV=1
P05419Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF05585DUF1758Putative peptidase (DUF1758)FamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF01896DNA_primase_SDNA primase small subunitFamilyInterproscan
PF01399PCIPCI domainDomainInterproscan
PF00348polyprenyl_syntPolyprenyl synthetaseDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR008737DomainPeptidase aspartic, putativeInterproscan
IPR039865FamilySerine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gammaInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR032458Conserved_siteHistone H2A conserved siteInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR002755FamilyDNA primase, small subunitInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR039702FamilyFarnesyl pyrophosphate synthase-likeInterproscan
IPR008949Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan
IPR000092FamilyPolyprenyl synthetaseInterproscan
IPR033749Conserved_sitePolyprenyl synthetase, conserved siteInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR12085SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B'' SUBUNIT GAMMAInterproscan
PTHR23430HISTONE H2AInterproscan
PTHR10536DNA PRIMASE SMALL SUBUNITInterproscan
PTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR19963CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0001782Biological ProcessB cell homeostasisInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005819Cellular ComponentspindleInterproscan
GO:0030865Biological Processcortical cytoskeleton organizationInterproscan
GO:0035303Biological Processregulation of dephosphorylationInterproscan
GO:0043029Biological ProcessT cell homeostasisInterproscan
GO:0045579Biological Processpositive regulation of B cell differentiationInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan
GO:0003896Molecular FunctionDNA primase activityInterproscan
GO:0006269Biological ProcessDNA replication, synthesis of primerInterproscan
GO:0005658Cellular Componentalpha DNA polymerase:primase complexInterproscan
GO:0004161Molecular Functiondimethylallyltranstransferase activityInterproscan
GO:0004337Molecular Functiongeranyltranstransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008299Biological Processisoprenoid biosynthetic processInterproscan
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0045337Biological Processfarnesyl diphosphate biosynthetic processInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11251H2A; histone H2A-Messenger RNA biogenesisko03019deepkoala
Prenyltransferasesko01006deepkoala
Exosomeko04147deepkoala

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