Detailed information of Aala_g2001.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_051988709.1, putative nuclease HARBI1 [Xyrauchen texanus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6AZB8Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1
Q9M2U3Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1
Q9NU22Midasin OS=Homo sapiens OX=9606 GN=MDN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17867AAA_lid_7Midasin AAA lid domainDomainInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF12325TMF_TATA_bdTATA element modulatory factor 1 TATA bindingCoiled-coilInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR040848DomainMidasin, AAA lid domain 7Interproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR024066Homologous_superfamilyRGS, subdomain 1/3Interproscan
IPR016137DomainRGS domainInterproscan
IPR036305Homologous_superfamilyRGS domain superfamilyInterproscan
IPR052602FamilyGrowth and transcription regulation proteinInterproscan
IPR022091DomainTATA element modulatory factor 1, TATA bindingInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48103MIDASIN-RELATEDInterproscan
PTHR47272DDE_TNP_1_7 DOMAIN-CONTAINING PROTEINInterproscan
PTHR46515TATA ELEMENT MODULATORY FACTOR TMF1Interproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR22930UNCHARACTERIZEDInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46114APPLE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000027Biological Processribosomal large subunit assemblyInterproscan
GO:0000055Biological Processribosomal large subunit export from nucleusInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan

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