Detailed information of Aala_g2005.t1 in Alatina alata

Genomic Location: :...
NR annotation: MCP4459908.1, hypothetical protein [Cytophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P04069Carboxypeptidase B OS=Astacus astacus OX=6715 PE=1 SV=1
Q6P8K8Carboxypeptidase A4 OS=Mus musculus OX=10090 GN=Cpa4 PE=2 SV=2
P42788Zinc carboxypeptidase (Fragment) OS=Simulium vittatum OX=7192 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01541GIY-YIGGIY-YIG catalytic domainDomainInterproscan
PF00481PP2CProtein phosphatase 2CFamilyInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00246Peptidase_M14Zinc carboxypeptidaseDomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF02023SCANSCAN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR000305DomainGIY-YIG endonucleaseInterproscan
IPR001932DomainPPM-type phosphatase-like domainInterproscan
IPR036457Homologous_superfamilyPPM-type phosphatase-like domain superfamilyInterproscan
IPR039190FamilyTetratricopeptide repeat protein 14Interproscan
IPR050972FamilySerine-aspartate repeat-containing proteinInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000834DomainPeptidase M14, carboxypeptidase AInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR003309DomainSCAN domainInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR23184TETRATRICOPEPTIDE REPEAT PROTEIN 14Interproscan
PTHR34403TOL-PAL SYSTEM PROTEIN TOLAInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24085NUCLEAR HORMONE RECEPTORInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR11705PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,BInterproscan
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035259Molecular Functionnuclear glucocorticoid receptor bindingInterproscan
GO:0071376Biological Processcellular response to corticotropin-releasing hormone stimulusInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004181Molecular Functionmetallocarboxypeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15203GTF3C6; general transcription factor 3C polypeptide 6-Transportersko02000deepkoala
Transcription machineryko03021deepkoala

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