Detailed information of Aala_g2019.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_039255206.1, SCAN domain-containing protein 3-like [Styela clava]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6R2W3SCAN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=SCAND3 PE=1 SV=1
Q3SY69Mitochondrial 10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens OX=9606 GN=ALDH1L2 PE=1 SV=2
Q6GNL7Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis OX=8355 GN=aldh1l1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00648Peptidase_C2Calpain family cysteine proteaseFamilyInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF1612240S_SA_C40S ribosomal protein SA C-terminusFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF04083Abhydro_lipasePartial alpha/beta-hydrolase lipase regionFamilyInterproscan
PF01997TranslinTranslin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001300DomainPeptidase C2, calpain, catalytic domainInterproscan
IPR050420FamilyCalpainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR023591Homologous_superfamilySmall ribosomal subunit protein uS2, flavodoxin-like domain superfamilyInterproscan
IPR005707FamilySmall ribosomal subunit protein uS2, eukaryotic/archaealInterproscan
IPR032281DomainSmall ribosomal subunit protein uS2, C-terminal domainInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR006693DomainPartial AB-hydrolase lipase domainInterproscan
IPR029058Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR036081Homologous_superfamilyTranslin superfamilyInterproscan
IPR002848FamilyTranslin familyInterproscan
IPR016068Homologous_superfamilyTranslin, N-terminalInterproscan
IPR016069Homologous_superfamilyTranslin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10183CALPAINInterproscan
PTHR11699ALDEHYDE DEHYDROGENASE-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR1148940S RIBOSOMAL PROTEIN SAInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR11005LYSOSOMAL ACID LIPASE-RELATEDInterproscan
PTHR10741TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004198Molecular Functioncalcium-dependent cysteine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0004029Molecular Functionaldehyde dehydrogenase (NAD+) activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0006629Biological Processlipid metabolic processInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004521Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14073PNLIP, PL; pancreatic triacylglycerol lipaseEC:3.1.1.3
Ribosomeko03011deepkoala
Vitamin digestion and absorptionko04977deepkoala

TOP