Detailed information of Aala_g202.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_028414345.1, uncharacterized protein K02A2.6-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9QZA2Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2
Q9WU78Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3
Q8WUM4Programmed cell death 6-interacting protein OS=Homo sapiens OX=9606 GN=PDCD6IP PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyCSD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14893PNMAPNMAFamilyInterproscan
PF00313CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03097BRO1BRO1-like domainRepeatInterproscan
PF13949ALIX_LYPXL_bndALIX V-shaped domain binding to HIV DomainInterproscan
PF13650Asp_protease_2Aspartyl proteaseDomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050181FamilyCold shock domain-containing proteinInterproscan
IPR002059DomainCold-shock protein, DNA-bindingInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR019844DomainCold-shock (CSD) domainInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR011129DomainCold shock domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR045251FamilyVacuolar protein-sorting protein Bro1-likeInterproscan
IPR004328DomainBRO1 domainInterproscan
IPR025304DomainALIX V-shaped domainInterproscan
IPR038499Homologous_superfamilyBRO1 domain superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR23030PCD6 INTERACTING PROTEIN-RELATEDInterproscan
PTHR11697GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0071985Biological Processmultivesicular body sorting pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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