Gene detail

Detailed information of Aala_g2022.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_015774068.1, PREDICTED: uncharacterized protein LOC107352253 [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5RBI5	Splicing factor 3B subunit 3 OS=Pongo abelii OX=9601 GN=SF3B3 PE=2 SV=1
A0JN52	Splicing factor 3B subunit 3 OS=Bos taurus OX=9913 GN=SF3B3 PE=2 SV=1
Q1LVE8	Splicing factor 3B subunit 3 OS=Danio rerio OX=7955 GN=sf3b3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027359	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24178	MOLTING PROTEIN MLT-4	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0097543	Cellular Component	ciliary inversin compartment	Interproscan
GO:1904108	Biological Process	protein localization to ciliary inversin compartment	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09648	IMP2; mitochondrial inner membrane protease subunit 2	EC:3.4.21.-	Mitochondrial biogenesis	ko03029	deepkoala