Detailed information of Aala_g2031.t1 in Alatina alata

Genomic Location: :...
NR annotation: AAW82079.1, thypedin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z410Transmembrane protease serine 9 OS=Homo sapiens OX=9606 GN=TMPRSS9 PE=1 SV=2
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF01290ThymosinThymosin beta-4 familyFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR050358FamilyRSE1/DDB1/CFT1/CPSF1Interproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR050127FamilySerine Proteases (Peptidase S1 Family)Interproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR038386Homologous_superfamilyBeta-thymosin superfamilyInterproscan
IPR001152FamilyBeta-thymosinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYInterproscan
PTHR34723PROTEIN CBG17025Interproscan
PTHR24264TRYPSIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR20940TETRA THYMOSINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0003785Molecular Functionactin monomer bindingInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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