Gene detail

Detailed information of Aala_g204.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020625177.1, GRIP and coiled-coil domain-containing protein 1-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9D4H2	GRIP and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Gcc1 PE=1 SV=2
Q96CN9	GRIP and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=GCC1 PE=1 SV=1
P08F94	Fibrocystin OS=Homo sapiens OX=9606 GN=PKHD1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF03638	TCR	Tesmin/TSO1-like CXC domain, cysteine-rich domain	Domain	Interproscan
PF13873	Myb_DNA-bind_5	Myb/SANT-like DNA-binding domain	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014010	Domain	REJ domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR033467	Domain	Tesmin/TSO1-like CXC domain	Interproscan
IPR005172	Domain	CRC domain	Interproscan
IPR028002	Domain	Myb/SANT-like DNA-binding domain 5	Interproscan
IPR037524	Domain	PA14/GLEYA domain	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR052542	Family	Cholesterol Oxidase Enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR23098	AGAP001331-PA-RELATED	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19303	TRANSPOSON	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR47470	CHOLESTEROL OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21987	POLR2M, GRINL1A; DNA-directed RNA polymerase II subunit GRINL1A	-	Transcription machinery	ko03021	deepkoala