Genomic Location: :...
NR annotation: CAB4027078.1, Retrovirus-related Pol poly from transposon TNT 1-94 [Paramuricea clavata]
| CDS |
| Transcript |
| Protein |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF18701 | DUF5641 | Family of unknown function (DUF5641) | Domain | Interproscan |
| PF14223 | Retrotran_gag_2 | gag-polypeptide of LTR copia-type | Family | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF14291 | DUF4371 | Domain of unknown function (DUF4371) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR040676 | Domain | Domain of unknown function DUF5641 | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR025398 | Domain | Domain of unknown function DUF4371 | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42648 | TRANSPOSASE, PUTATIVE-RELATED | Interproscan |
| PTHR22955 | RETROTRANSPOSON | Interproscan |
| PTHR47481 | - | Interproscan |
| PTHR11697 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN | Interproscan |
| PTHR47018 | CXC DOMAIN-CONTAINING PROTEIN-RELATED | Interproscan |
| PTHR47027 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
