Gene detail

Detailed information of Aala_g2047.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019626521.1, PREDICTED: ornithine aminotransferase, mitochondrial-like [Branchiostoma belcheri]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9VW26	Ornithine aminotransferase, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Oat PE=2 SV=1
P49724	Ornithine aminotransferase, mitochondrial OS=Drosophila ananassae OX=7217 GN=Oat PE=1 SV=1
Q3ZCF5	Ornithine aminotransferase, mitochondrial OS=Bos taurus OX=9913 GN=OAT PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00202	Aminotran_3	Aminotransferase class-III	Domain	Interproscan
PF13842	Tnp_zf-ribbon_2	DDE_Tnp_1-like zinc-ribbon	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050538	Family	Mitogen-activated protein kinase kinase kinase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR050103	Family	Class-III Pyridoxal-phosphate-dependent Aminotransferase	Interproscan
IPR005814	Family	Aminotransferase class-III	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR032718	Domain	PiggyBac transposable element-derived protein 4, C-terminal zinc-ribbon	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR050740	Family	Aldehyde Dehydrogenase Superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR48016	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan
PTHR11986	AMINOTRANSFERASE CLASS III	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR43353	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004587	Molecular Function	ornithine aminotransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0010121	Biological Process	arginine catabolic process to proline via ornithine	Interproscan
GO:0019544	Biological Process	arginine catabolic process to glutamate	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0042802	Molecular Function	identical protein binding	Interproscan
GO:0008483	Molecular Function	transaminase activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0004777	Molecular Function	succinate-semialdehyde dehydrogenase (NAD+) activity	Interproscan
GO:0006807	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0009450	Biological Process	gamma-aminobutyric acid catabolic process	Interproscan