Detailed information of Aala_g2054.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_029643893.1, SCAN domain-containing protein 3-like [Octopus sinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P00185Cytochrome P450 1A1 OS=Rattus norvegicus OX=10116 GN=Cyp1a1 PE=1 SV=1
P00184Cytochrome P450 1A1 OS=Mus musculus OX=10090 GN=Cyp1a1 PE=1 SV=2
Q92116Cytochrome P450 1A1 OS=Stenotomus chrysops OX=35579 GN=cyp1a1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07189SF3b10Splicing factor 3B subunit 10 (SF3b10)FamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00067p450Cytochrome P450DomainInterproscan
PF09751Es2Nuclear protein Es2FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009846FamilySplicing factor 3B subunit 5/RDS3 complex subunit 10Interproscan
IPR017089FamilySplicing factor 3B, subunit 5Interproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036396Homologous_superfamilyCytochrome P450 superfamilyInterproscan
IPR002401FamilyCytochrome P450, E-class, group IInterproscan
IPR050182FamilyCytochrome P450 family 2Interproscan
IPR001128FamilyCytochrome P450Interproscan
IPR017972Conserved_siteCytochrome P450, conserved siteInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR019148FamilyNuclear protein DGCR14/ESS-2Interproscan
IPR005819FamilyLinker histone H1/H5Interproscan
IPR031160DomainF-BAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20978SPLICING FACTOR 3B SUBUNIT 5Interproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR33776ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR33198ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24300CYTOCHROME P450 508A4-RELATEDInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR12940ES-2 PROTEIN - RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004497Molecular Functionmonooxygenase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0020037Molecular Functionheme bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006082Biological Processorganic acid metabolic processInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0016712Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygenInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12832SF3B5, SF3B10; splicing factor 3B subunit 5-Ribosome biogenesisko03009deepkoala
Spliceosomeko03041deepkoala

TOP